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The Brain Imaging Data Structure (BIDS) ecosystem - Exercise

Description:

  • This exercise is a copy from Brainkhack School, with small adaptations and changes in the recipient.

Instructions:

  • Download this file which contains instructions to the module exercise.
  • Answer the two questions in the document by filling in your response in the document.
  • Open up a Jypyter notebook and follow along the instructions in the markdown file. A successful attempt should contain both the list of the flip angles in DS000228 using pybids and a pandas dataframe using pybids generated from the Midnight Brain Scan dataset in different cells.

Submission:

  • Upload your Jupyter notebook onto Google Colab. Name your file as The Brain Imaging Data Structure (BIDS) ecosystem. Click Share at the top right of the window and add brainhackschooltaiwan@gmail.com as an editor and copy the link.
  • Send an email to brainhackschooltaiwan@gmail.com with the subject title [BHSTW] <Your_Student_ID> The Brain Imaging Data Structure (BIDS) ecosystem (e.g., [BHSTW] R08454015 The Brain Imaging Data Structure (BIDS) ecosystem). Make sure that the email contains:
    1. The link to the Google Colab notebook in the body.
    2. The markdown file with the two questions answered.
  • Attempts: no limits. Multiple attempts are allowed until you are satisfied with your score.
  • Points: 0 (fail) / 1 (pass)